fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rubrimonas cliftonensis DSM 15345

Genome identifier: GCF_900107585.1

NCBI assembly name: IMG-taxon 2693429904 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Rubrimonas, Rubrimonas cliftonensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Rubrimonas, Rubrimonas cliftonensis

Scaffolds: 98

Genes: 4,645 Protein-coding: 4,493 RNAs: 51 pseudogenes: 101

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNQM01000001.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 588,276
NZ_FNQM01000002.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 583,907
NZ_FNQM01000003.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 580,140
NZ_FNQM01000004.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 379,826
NZ_FNQM01000005.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 250,225
NZ_FNQM01000006.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 247,776
NZ_FNQM01000007.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 179,432
NZ_FNQM01000008.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 156,612
NZ_FNQM01000009.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 151,738
NZ_FNQM01000010.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 148,871
NZ_FNQM01000011.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 138,852
NZ_FNQM01000012.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 108,128
NZ_FNQM01000013.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 106,711
NZ_FNQM01000014.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 97,738
NZ_FNQM01000015.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 79,034
NZ_FNQM01000016.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 68,833
NZ_FNQM01000017.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 64,792
NZ_FNQM01000018.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 58,007
NZ_FNQM01000019.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 51,961
NZ_FNQM01000020.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 46,817
NZ_FNQM01000021.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 44,161
NZ_FNQM01000022.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 37,987
NZ_FNQM01000023.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 35,779
NZ_FNQM01000024.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 35,154
NZ_FNQM01000025.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 34,716
NZ_FNQM01000026.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 33,656
NZ_FNQM01000027.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 32,847
NZ_FNQM01000028.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 29,553
NZ_FNQM01000029.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 28,713
NZ_FNQM01000030.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 28,407
NZ_FNQM01000031.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 25,525
NZ_FNQM01000032.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 25,042
NZ_FNQM01000033.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 24,531
NZ_FNQM01000034.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 23,665
NZ_FNQM01000035.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 22,448
NZ_FNQM01000036.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 17,698
NZ_FNQM01000037.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 15,231
NZ_FNQM01000038.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 14,790
NZ_FNQM01000039.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 14,334
NZ_FNQM01000040.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 12,746
NZ_FNQM01000041.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 12,140
NZ_FNQM01000042.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 11,762
NZ_FNQM01000043.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 11,443
NZ_FNQM01000044.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 11,231
NZ_FNQM01000045.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 9,830
NZ_FNQM01000046.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 9,060
NZ_FNQM01000047.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 8,046
NZ_FNQM01000048.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 7,564
NZ_FNQM01000049.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 7,308
NZ_FNQM01000050.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 7,267
NZ_FNQM01000051.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 7,072
NZ_FNQM01000052.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 6,738
NZ_FNQM01000053.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 6,608
NZ_FNQM01000054.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 6,577
NZ_FNQM01000055.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 5,814
NZ_FNQM01000056.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 5,347
NZ_FNQM01000057.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 5,432
NZ_FNQM01000058.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 5,360
NZ_FNQM01000059.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 5,177
NZ_FNQM01000060.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 4,813
NZ_FNQM01000061.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 4,775
NZ_FNQM01000062.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 4,512
NZ_FNQM01000063.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 4,277
NZ_FNQM01000064.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 4,126
NZ_FNQM01000065.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 4,030
NZ_FNQM01000066.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 3,713
NZ_FNQM01000067.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 3,339
NZ_FNQM01000068.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,951
NZ_FNQM01000069.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,856
NZ_FNQM01000070.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,761
NZ_FNQM01000071.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,547
NZ_FNQM01000072.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,503
NZ_FNQM01000073.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,499
NZ_FNQM01000074.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,339
NZ_FNQM01000075.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,278
NZ_FNQM01000076.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 2,084
NZ_FNQM01000077.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,984
NZ_FNQM01000078.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,905
NZ_FNQM01000079.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,828
NZ_FNQM01000080.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,828
NZ_FNQM01000081.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,809
NZ_FNQM01000082.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,758
NZ_FNQM01000083.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,746
NZ_FNQM01000084.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,743
NZ_FNQM01000085.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,732
NZ_FNQM01000086.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,642
NZ_FNQM01000087.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,628
NZ_FNQM01000088.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,609
NZ_FNQM01000089.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,403
NZ_FNQM01000090.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,359
NZ_FNQM01000091.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,321
NZ_FNQM01000092.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,214
NZ_FNQM01000093.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,214
NZ_FNQM01000094.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,176
NZ_FNQM01000095.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,142
NZ_FNQM01000096.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,107
NZ_FNQM01000097.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,049
NZ_FNQM01000098.1 Rubrimonas cliftonensis strain DSM 15345, whole genome shotgun sequence 1,033

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory