fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thalassococcus halodurans DSM 26915

Genome identifier: GCF_900108225.1

NCBI assembly name: IMG-taxon 2617270859 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Thalassococcus, Thalassococcus halodurans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Thalassococcus, Thalassococcus halodurans

Scaffolds: 12

Genes: 3,903 Protein-coding: 3,820 RNAs: 58 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNUZ01000001.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 1,023,017
NZ_FNUZ01000002.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 1,005,817
NZ_FNUZ01000003.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 549,042
NZ_FNUZ01000004.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 413,359
NZ_FNUZ01000005.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 258,598
NZ_FNUZ01000006.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 241,146
NZ_FNUZ01000007.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 189,418
NZ_FNUZ01000008.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 96,339
NZ_FNUZ01000009.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 77,634
NZ_FNUZ01000010.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 56,200
NZ_FNUZ01000011.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 42,224
NZ_FNUZ01000012.1 Thalassococcus halodurans strain DSM 26915, whole genome shotgun sequence 19,118

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory