fast.genomicscompare 6,575 genera of bacteria & archaea

 

Cribrihabitans marinus DSM 29340

Genome identifier: GCF_900109035.1

NCBI assembly name: IMG-taxon 2693429871 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Cribrihabitans, Cribrihabitans marinus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Cribrihabitans, Cribrihabitans marinus

Scaffolds: 33

Genes: 4,112 Protein-coding: 4,028 RNAs: 49 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNYD01000001.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 502,353
NZ_FNYD01000002.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 501,121
NZ_FNYD01000003.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 468,708
NZ_FNYD01000004.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 435,401
NZ_FNYD01000005.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 331,217
NZ_FNYD01000006.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 282,982
NZ_FNYD01000007.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 268,616
NZ_FNYD01000008.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 264,113
NZ_FNYD01000009.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 181,506
NZ_FNYD01000010.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 165,001
NZ_FNYD01000011.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 160,471
NZ_FNYD01000012.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 127,213
NZ_FNYD01000013.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 83,715
NZ_FNYD01000014.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 79,753
NZ_FNYD01000015.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 59,889
NZ_FNYD01000016.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 51,131
NZ_FNYD01000017.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 40,934
NZ_FNYD01000018.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 24,894
NZ_FNYD01000019.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 24,801
NZ_FNYD01000020.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 23,024
NZ_FNYD01000021.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 21,118
NZ_FNYD01000022.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 15,517
NZ_FNYD01000023.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 14,136
NZ_FNYD01000024.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 13,051
NZ_FNYD01000025.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 10,422
NZ_FNYD01000026.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 6,193
NZ_FNYD01000027.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 5,605
NZ_FNYD01000028.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 4,928
NZ_FNYD01000029.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 2,385
NZ_FNYD01000030.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 1,805
NZ_FNYD01000031.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 1,692
NZ_FNYD01000032.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 1,176
NZ_FNYD01000033.1 Cribrihabitans marinus strain DSM 29340, whole genome shotgun sequence 1,051

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory