fast.genomicscompare 6,575 genera of bacteria & archaea

 

Cognatiyoonia koreensis DSM 17925

Genome identifier: GCF_900109295.1

NCBI assembly name: IMG-taxon 2619619643 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Cognatiyoonia, Cognatiyoonia koreensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Cognatiyoonia, Cognatiyoonia koreensis

Scaffolds: 4

Genes: 3,624 Protein-coding: 3,574 RNAs: 46 pseudogenes: 4

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOIZ01000001.1 Cognatiyoonia koreensis strain DSM 17925, whole genome shotgun sequence 2,366,996
NZ_FOIZ01000002.1 Cognatiyoonia koreensis strain DSM 17925, whole genome shotgun sequence 1,173,808
NZ_FOIZ01000003.1 Cognatiyoonia koreensis strain DSM 17925, whole genome shotgun sequence 79,471
NZ_FOIZ01000004.1 Cognatiyoonia koreensis strain DSM 17925, whole genome shotgun sequence 27,956

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory