fast.genomicscompare 6,575 genera of bacteria & archaea

 

Stigmatella aurantiaca DSM 17044

Genome identifier: GCF_900109545.1

NCBI assembly name: IMG-taxon 2693429895 annotated assembly

GTDB taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Myxococcaceae, Stigmatella, Stigmatella aurantiaca

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Archangiaceae, Stigmatella, Stigmatella aurantiaca

Scaffolds: 61

Genes: 7,468 Protein-coding: 7,354 RNAs: 56 pseudogenes: 58

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOAP01000001.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,079,738
NZ_FOAP01000002.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 572,837
NZ_FOAP01000003.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 552,472
NZ_FOAP01000004.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 464,218
NZ_FOAP01000005.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 463,759
NZ_FOAP01000006.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 452,633
NZ_FOAP01000007.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 431,953
NZ_FOAP01000008.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 374,726
NZ_FOAP01000009.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 372,432
NZ_FOAP01000010.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 356,224
NZ_FOAP01000011.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 278,459
NZ_FOAP01000012.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 260,195
NZ_FOAP01000013.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 232,260
NZ_FOAP01000014.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 224,645
NZ_FOAP01000015.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 216,327
NZ_FOAP01000016.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 206,075
NZ_FOAP01000017.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 204,601
NZ_FOAP01000018.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 199,463
NZ_FOAP01000019.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 176,256
NZ_FOAP01000020.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 163,902
NZ_FOAP01000021.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 159,096
NZ_FOAP01000022.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 154,747
NZ_FOAP01000023.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 153,117
NZ_FOAP01000024.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 143,443
NZ_FOAP01000025.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 142,789
NZ_FOAP01000026.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 135,944
NZ_FOAP01000027.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 127,880
NZ_FOAP01000028.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 126,911
NZ_FOAP01000029.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 109,100
NZ_FOAP01000030.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 101,816
NZ_FOAP01000031.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 101,451
NZ_FOAP01000032.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 96,484
NZ_FOAP01000033.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 95,736
NZ_FOAP01000034.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 85,030
NZ_FOAP01000035.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 75,108
NZ_FOAP01000036.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 62,101
NZ_FOAP01000037.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 55,797
NZ_FOAP01000038.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 48,259
NZ_FOAP01000039.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 18,865
NZ_FOAP01000040.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 15,953
NZ_FOAP01000041.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 10,055
NZ_FOAP01000042.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 7,742
NZ_FOAP01000043.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 6,978
NZ_FOAP01000044.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 6,692
NZ_FOAP01000045.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 6,224
NZ_FOAP01000046.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 5,346
NZ_FOAP01000047.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 4,844
NZ_FOAP01000048.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 3,415
NZ_FOAP01000049.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 2,615
NZ_FOAP01000050.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 2,534
NZ_FOAP01000051.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 2,049
NZ_FOAP01000052.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,787
NZ_FOAP01000053.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,652
NZ_FOAP01000054.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,639
NZ_FOAP01000055.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,527
NZ_FOAP01000056.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,483
NZ_FOAP01000057.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,430
NZ_FOAP01000058.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,404
NZ_FOAP01000059.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,221
NZ_FOAP01000060.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,195
NZ_FOAP01000061.1 Stigmatella aurantiaca strain DSM 17044, whole genome shotgun sequence 1,133

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory