fast.genomicscompare 6,575 genera of bacteria & archaea

 

Hominimerdicola alba_B KH2T6

Genome identifier: GCF_900109655.1

NCBI assembly name: IMG-taxon 2651870358 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Hominimerdicola, Hominimerdicola alba_B

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruminococcus, Ruminococcus albus

Scaffolds: 47

Genes: 3,495 Protein-coding: 3,361 RNAs: 80 pseudogenes: 54

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOAT01000001.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 423,501
NZ_FOAT01000002.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 421,559
NZ_FOAT01000003.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 418,867
NZ_FOAT01000004.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 268,462
NZ_FOAT01000005.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 223,605
NZ_FOAT01000006.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 213,802
NZ_FOAT01000007.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 161,685
NZ_FOAT01000008.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 159,959
NZ_FOAT01000009.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 155,798
NZ_FOAT01000010.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 140,065
NZ_FOAT01000011.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 131,648
NZ_FOAT01000012.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 123,215
NZ_FOAT01000013.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 99,678
NZ_FOAT01000014.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 98,974
NZ_FOAT01000015.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 98,446
NZ_FOAT01000016.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 75,346
NZ_FOAT01000017.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 64,047
NZ_FOAT01000018.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 56,993
NZ_FOAT01000019.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 55,972
NZ_FOAT01000020.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 51,081
NZ_FOAT01000021.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 48,781
NZ_FOAT01000022.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 39,515
NZ_FOAT01000023.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 38,978
NZ_FOAT01000024.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 30,306
NZ_FOAT01000025.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 28,525
NZ_FOAT01000026.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 27,046
NZ_FOAT01000027.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 24,144
NZ_FOAT01000028.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 22,428
NZ_FOAT01000029.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 19,732
NZ_FOAT01000030.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 15,107
NZ_FOAT01000031.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 13,705
NZ_FOAT01000032.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 13,286
NZ_FOAT01000033.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 12,005
NZ_FOAT01000034.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 10,319
NZ_FOAT01000035.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 9,107
NZ_FOAT01000036.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 7,821
NZ_FOAT01000037.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 7,366
NZ_FOAT01000038.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 6,835
NZ_FOAT01000039.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 5,645
NZ_FOAT01000040.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 5,352
NZ_FOAT01000041.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 4,995
NZ_FOAT01000042.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 2,641
NZ_FOAT01000043.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 2,336
NZ_FOAT01000044.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 2,050
NZ_FOAT01000045.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 1,785
NZ_FOAT01000046.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 1,676
NZ_FOAT01000047.1 Ruminococcus albus strain KH2T6, whole genome shotgun sequence 1,056

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory