fast.genomicscompare 6,575 genera of bacteria & archaea

 

Atopomonas hussainii JCM 19513

Genome identifier: GCF_900109735.1

NCBI assembly name: IMG-taxon 2663763602 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Atopomonas, Atopomonas hussainii

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Atopomonas, Atopomonas hussainii

Scaffolds: 45

Genes: 3,519 Protein-coding: 3,424 RNAs: 70 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOAS01000001.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 359,612
NZ_FOAS01000002.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 315,477
NZ_FOAS01000003.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 278,958
NZ_FOAS01000004.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 251,241
NZ_FOAS01000005.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 235,912
NZ_FOAS01000006.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 221,341
NZ_FOAS01000007.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 215,245
NZ_FOAS01000008.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 201,853
NZ_FOAS01000009.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 191,573
NZ_FOAS01000010.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 173,870
NZ_FOAS01000011.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 163,819
NZ_FOAS01000012.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 157,754
NZ_FOAS01000013.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 135,335
NZ_FOAS01000014.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 128,876
NZ_FOAS01000015.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 116,326
NZ_FOAS01000016.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 67,449
NZ_FOAS01000017.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 66,901
NZ_FOAS01000018.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 66,660
NZ_FOAS01000019.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 59,151
NZ_FOAS01000020.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 58,476
NZ_FOAS01000021.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 57,337
NZ_FOAS01000022.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 28,012
NZ_FOAS01000023.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 19,276
NZ_FOAS01000024.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 17,810
NZ_FOAS01000025.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 17,853
NZ_FOAS01000026.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 16,077
NZ_FOAS01000027.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 12,091
NZ_FOAS01000028.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 7,376
NZ_FOAS01000029.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 6,430
NZ_FOAS01000030.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 5,847
NZ_FOAS01000031.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 4,047
NZ_FOAS01000032.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 2,705
NZ_FOAS01000033.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,768
NZ_FOAS01000034.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,559
NZ_FOAS01000035.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,577
NZ_FOAS01000036.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,566
NZ_FOAS01000037.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,387
NZ_FOAS01000038.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,226
NZ_FOAS01000039.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,286
NZ_FOAS01000040.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,270
NZ_FOAS01000041.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,207
NZ_FOAS01000042.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,124
NZ_FOAS01000043.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,156
NZ_FOAS01000044.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 1,097
NZ_FOAS01000045.1 Atopomonas hussainii strain JCM 19513, whole genome shotgun sequence 5,401

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory