fast.genomicscompare 6,575 genera of bacteria & archaea

 

Litorimicrobium taeanense DSM 22007

Genome identifier: GCF_900110775.1

NCBI assembly name: IMG-taxon 2615840713 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Litorimicrobium, Litorimicrobium taeanense

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Thalassobius, Thalassobius taeanensis

Scaffolds: 37

Genes: 3,911 Protein-coding: 3,815 RNAs: 50 pseudogenes: 46

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOEP01000001.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 521,784
NZ_FOEP01000002.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 483,683
NZ_FOEP01000003.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 413,472
NZ_FOEP01000004.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 350,679
NZ_FOEP01000005.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 268,237
NZ_FOEP01000006.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 236,870
NZ_FOEP01000007.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 186,426
NZ_FOEP01000008.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 147,564
NZ_FOEP01000009.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 140,077
NZ_FOEP01000010.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 129,867
NZ_FOEP01000011.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 119,405
NZ_FOEP01000012.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 117,905
NZ_FOEP01000013.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 110,110
NZ_FOEP01000014.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 108,880
NZ_FOEP01000015.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 100,129
NZ_FOEP01000016.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 98,489
NZ_FOEP01000017.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 95,008
NZ_FOEP01000018.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 82,670
NZ_FOEP01000019.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 49,666
NZ_FOEP01000020.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 49,026
NZ_FOEP01000021.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 42,310
NZ_FOEP01000022.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 36,525
NZ_FOEP01000023.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 30,550
NZ_FOEP01000024.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 23,822
NZ_FOEP01000025.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 17,393
NZ_FOEP01000026.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 14,035
NZ_FOEP01000027.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 11,571
NZ_FOEP01000028.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 6,226
NZ_FOEP01000029.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 4,660
NZ_FOEP01000030.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 4,529
NZ_FOEP01000031.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 3,840
NZ_FOEP01000032.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 3,665
NZ_FOEP01000033.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 2,706
NZ_FOEP01000034.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 2,519
NZ_FOEP01000035.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 2,261
NZ_FOEP01000036.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 1,734
NZ_FOEP01000037.1 Thalassobius taeanensis strain DSM 22007, whole genome shotgun sequence 1,221

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory