fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_N fimetarium DSM 9179

Genome identifier: GCF_900111235.1

NCBI assembly name: IMG-taxon 2675903166 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Clostridium_N, Clostridium_N fimetarium

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Lachnoclostridium, [Clostridium] fimetarium

Scaffolds: 48

Genes: 4,177 Protein-coding: 4,089 RNAs: 62 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOJI01000001.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 557,293
NZ_FOJI01000002.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 461,681
NZ_FOJI01000003.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 398,959
NZ_FOJI01000004.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 281,885
NZ_FOJI01000005.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 279,395
NZ_FOJI01000006.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 239,424
NZ_FOJI01000007.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 228,153
NZ_FOJI01000008.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 216,333
NZ_FOJI01000009.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 202,926
NZ_FOJI01000010.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 199,525
NZ_FOJI01000011.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 194,941
NZ_FOJI01000012.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 159,962
NZ_FOJI01000013.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 124,956
NZ_FOJI01000014.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 112,246
NZ_FOJI01000015.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 101,006
NZ_FOJI01000016.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 85,853
NZ_FOJI01000017.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 81,871
NZ_FOJI01000018.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 76,093
NZ_FOJI01000019.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 71,719
NZ_FOJI01000020.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 68,533
NZ_FOJI01000021.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 65,344
NZ_FOJI01000022.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 63,163
NZ_FOJI01000023.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 41,041
NZ_FOJI01000024.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 34,496
NZ_FOJI01000025.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 32,664
NZ_FOJI01000026.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 30,860
NZ_FOJI01000027.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 22,891
NZ_FOJI01000028.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 21,942
NZ_FOJI01000029.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 18,751
NZ_FOJI01000030.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 18,354
NZ_FOJI01000031.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 11,486
NZ_FOJI01000032.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 9,980
NZ_FOJI01000033.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 9,903
NZ_FOJI01000034.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 6,975
NZ_FOJI01000035.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 6,529
NZ_FOJI01000036.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 6,239
NZ_FOJI01000037.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 3,011
NZ_FOJI01000038.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 2,603
NZ_FOJI01000039.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 2,535
NZ_FOJI01000040.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 2,213
NZ_FOJI01000041.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 2,178
NZ_FOJI01000042.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 2,066
NZ_FOJI01000043.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 1,965
NZ_FOJI01000044.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 1,891
NZ_FOJI01000045.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 1,722
NZ_FOJI01000046.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 1,694
NZ_FOJI01000047.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 1,603
NZ_FOJI01000048.1 [Clostridium] fimetarium strain DSM 9179, whole genome shotgun sequence 1,330

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory