fast.genomicscompare 6,575 genera of bacteria & archaea

 

Trichloromonas acetexigens DSM 1397

Genome identifier: GCF_900111775.1

NCBI assembly name: ASM90011177v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, Trichloromonadaceae, Trichloromonas, Trichloromonas acetexigens

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Desulfuromonadaceae, Desulfuromonas, Desulfuromonas acetexigens

Scaffolds: 41

Genes: 3,460 Protein-coding: 3,382 RNAs: 63 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOJJ01000001.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 587,354
NZ_FOJJ01000002.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 125,432
NZ_FOJJ01000003.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 97,575
NZ_FOJJ01000004.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 95,534
NZ_FOJJ01000005.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 84,812
NZ_FOJJ01000006.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 77,256
NZ_FOJJ01000007.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 66,991
NZ_FOJJ01000008.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 58,899
NZ_FOJJ01000009.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 57,301
NZ_FOJJ01000010.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 55,183
NZ_FOJJ01000011.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 49,452
NZ_FOJJ01000012.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 427,161
NZ_FOJJ01000013.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 34,730
NZ_FOJJ01000014.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 17,118
NZ_FOJJ01000015.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 13,725
NZ_FOJJ01000016.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 9,189
NZ_FOJJ01000017.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 8,707
NZ_FOJJ01000018.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 7,016
NZ_FOJJ01000019.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 5,794
NZ_FOJJ01000020.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 5,238
NZ_FOJJ01000021.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 4,699
NZ_FOJJ01000022.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 3,539
NZ_FOJJ01000023.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 371,834
NZ_FOJJ01000024.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,970
NZ_FOJJ01000025.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,914
NZ_FOJJ01000026.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,732
NZ_FOJJ01000027.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,661
NZ_FOJJ01000028.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,634
NZ_FOJJ01000029.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,341
NZ_FOJJ01000030.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,335
NZ_FOJJ01000031.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,234
NZ_FOJJ01000032.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,086
NZ_FOJJ01000033.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 1,080
NZ_FOJJ01000034.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 328,316
NZ_FOJJ01000035.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 917
NZ_FOJJ01000036.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 654
NZ_FOJJ01000037.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 301,105
NZ_FOJJ01000038.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 226,046
NZ_FOJJ01000039.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 204,508
NZ_FOJJ01000040.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 174,375
NZ_FOJJ01000041.1 Desulfuromonas acetexigens isolate DSM 1397, whole genome shotgun sequence 167,678

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory