fast.genomicscompare 6,575 genera of bacteria & archaea

 

Acetitomaculum ruminis DSM 5522

Genome identifier: GCF_900112085.1

NCBI assembly name: IMG-taxon 2651870361 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Acetitomaculum, Acetitomaculum ruminis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Acetitomaculum, Acetitomaculum ruminis

Scaffolds: 54

Genes: 2,704 Protein-coding: 2,612 RNAs: 52 pseudogenes: 40

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOJY01000001.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 276,859
NZ_FOJY01000002.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 256,456
NZ_FOJY01000003.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 202,474
NZ_FOJY01000004.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 195,197
NZ_FOJY01000005.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 191,418
NZ_FOJY01000006.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 188,962
NZ_FOJY01000007.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 184,180
NZ_FOJY01000008.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 141,703
NZ_FOJY01000009.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 134,453
NZ_FOJY01000010.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 124,219
NZ_FOJY01000011.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 114,766
NZ_FOJY01000012.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 107,026
NZ_FOJY01000013.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 94,984
NZ_FOJY01000014.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 94,675
NZ_FOJY01000015.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 80,525
NZ_FOJY01000016.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 80,212
NZ_FOJY01000017.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 79,795
NZ_FOJY01000018.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 78,917
NZ_FOJY01000019.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 39,552
NZ_FOJY01000020.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 38,370
NZ_FOJY01000021.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 37,661
NZ_FOJY01000022.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 36,346
NZ_FOJY01000023.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 35,282
NZ_FOJY01000024.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 34,582
NZ_FOJY01000025.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 31,692
NZ_FOJY01000026.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 28,654
NZ_FOJY01000027.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 27,150
NZ_FOJY01000028.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 20,862
NZ_FOJY01000029.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 17,823
NZ_FOJY01000030.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 15,709
NZ_FOJY01000031.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 10,838
NZ_FOJY01000032.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 9,423
NZ_FOJY01000033.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 8,330
NZ_FOJY01000034.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 8,366
NZ_FOJY01000035.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 6,013
NZ_FOJY01000036.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 5,912
NZ_FOJY01000037.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 5,229
NZ_FOJY01000038.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 4,631
NZ_FOJY01000039.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 4,630
NZ_FOJY01000040.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 3,252
NZ_FOJY01000041.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 3,236
NZ_FOJY01000042.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 2,737
NZ_FOJY01000043.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 2,653
NZ_FOJY01000044.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 2,369
NZ_FOJY01000045.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,789
NZ_FOJY01000046.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,695
NZ_FOJY01000047.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,688
NZ_FOJY01000048.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,628
NZ_FOJY01000049.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,581
NZ_FOJY01000050.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,496
NZ_FOJY01000051.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,329
NZ_FOJY01000052.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,313
NZ_FOJY01000053.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,073
NZ_FOJY01000054.1 Acetitomaculum ruminis DSM 5522, whole genome shotgun sequence 1,006

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory