fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thiohalospira halophila HL 3

Genome identifier: GCF_900112605.1

NCBI assembly name: IMG-taxon 2595698212 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Thiohalospirales, Thiohalospiraceae, Thiohalospira, Thiohalospira halophila

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Ectothiorhodospiraceae, Thiohalospira, Thiohalospira halophila

Scaffolds: 23

Genes: 2,730 Protein-coding: 2,649 RNAs: 52 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOMJ01000001.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 814,936
NZ_FOMJ01000002.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 293,104
NZ_FOMJ01000003.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 248,128
NZ_FOMJ01000004.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 215,901
NZ_FOMJ01000005.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 208,018
NZ_FOMJ01000006.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 207,177
NZ_FOMJ01000007.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 158,184
NZ_FOMJ01000008.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 120,733
NZ_FOMJ01000009.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 114,240
NZ_FOMJ01000010.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 98,972
NZ_FOMJ01000011.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 47,062
NZ_FOMJ01000012.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 46,749
NZ_FOMJ01000013.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 36,444
NZ_FOMJ01000014.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 22,084
NZ_FOMJ01000015.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 19,074
NZ_FOMJ01000016.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 15,446
NZ_FOMJ01000017.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 6,332
NZ_FOMJ01000018.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 5,947
NZ_FOMJ01000019.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 2,225
NZ_FOMJ01000020.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 2,034
NZ_FOMJ01000021.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 1,885
NZ_FOMJ01000022.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 1,635
NZ_FOMJ01000023.1 Thiohalospira halophila DSM 15071 strain HL 3, whole genome shotgun sequence 1,387

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory