fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aquamicrobium_A aerolatum DSM 21857

Genome identifier: GCF_900113935.1

NCBI assembly name: IMG-taxon 2595699008 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Aquamicrobium_A, Aquamicrobium_A aerolatum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Aquamicrobium, Aquamicrobium aerolatum

Scaffolds: 49

Genes: 3,564 Protein-coding: 3,442 RNAs: 55 pseudogenes: 67

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FORF01000001.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 345,454
NZ_FORF01000002.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 301,358
NZ_FORF01000003.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 235,709
NZ_FORF01000004.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 205,162
NZ_FORF01000005.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 191,907
NZ_FORF01000006.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 191,695
NZ_FORF01000007.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 181,563
NZ_FORF01000008.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 170,747
NZ_FORF01000009.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 156,896
NZ_FORF01000010.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 155,463
NZ_FORF01000011.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 154,138
NZ_FORF01000012.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 143,473
NZ_FORF01000013.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 124,517
NZ_FORF01000014.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 105,856
NZ_FORF01000015.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 103,113
NZ_FORF01000016.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 97,905
NZ_FORF01000017.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 84,746
NZ_FORF01000018.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 82,903
NZ_FORF01000019.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 54,107
NZ_FORF01000020.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 44,456
NZ_FORF01000021.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 42,034
NZ_FORF01000022.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 41,587
NZ_FORF01000023.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 39,482
NZ_FORF01000024.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 37,892
NZ_FORF01000025.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 30,759
NZ_FORF01000026.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 27,344
NZ_FORF01000027.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 26,271
NZ_FORF01000028.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 22,853
NZ_FORF01000029.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 22,092
NZ_FORF01000030.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 21,976
NZ_FORF01000031.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 21,865
NZ_FORF01000032.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 21,420
NZ_FORF01000033.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 18,863
NZ_FORF01000034.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 17,057
NZ_FORF01000035.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 16,766
NZ_FORF01000036.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 16,148
NZ_FORF01000037.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 14,776
NZ_FORF01000038.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 14,391
NZ_FORF01000039.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 11,155
NZ_FORF01000040.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 9,492
NZ_FORF01000041.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 7,515
NZ_FORF01000042.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 6,259
NZ_FORF01000043.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 5,625
NZ_FORF01000044.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 5,225
NZ_FORF01000045.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 3,033
NZ_FORF01000046.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 2,361
NZ_FORF01000047.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 2,188
NZ_FORF01000048.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 1,502
NZ_FORF01000049.1 Aquamicrobium aerolatum DSM 21857, whole genome shotgun sequence 1,113

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory