fast.genomicscompare 6,575 genera of bacteria & archaea

 

Donghicola eburneus DSM 29127

Genome identifier: GCF_900115865.1

NCBI assembly name: IMG-taxon 2684622851 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Donghicola, Donghicola eburneus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Donghicola, Donghicola eburneus

Scaffolds: 59

Genes: 4,319 Protein-coding: 4,188 RNAs: 56 pseudogenes: 75

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FOXY01000001.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 559,141
NZ_FOXY01000002.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 549,690
NZ_FOXY01000003.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 448,080
NZ_FOXY01000004.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 422,209
NZ_FOXY01000005.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 397,211
NZ_FOXY01000006.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 282,708
NZ_FOXY01000007.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 245,242
NZ_FOXY01000008.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 217,447
NZ_FOXY01000009.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 214,584
NZ_FOXY01000010.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 132,294
NZ_FOXY01000011.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 117,991
NZ_FOXY01000012.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 94,432
NZ_FOXY01000013.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 77,010
NZ_FOXY01000014.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 72,966
NZ_FOXY01000015.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 71,374
NZ_FOXY01000016.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 64,796
NZ_FOXY01000017.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 54,236
NZ_FOXY01000018.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 43,772
NZ_FOXY01000019.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 35,426
NZ_FOXY01000020.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 34,052
NZ_FOXY01000021.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 30,015
NZ_FOXY01000022.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 22,474
NZ_FOXY01000023.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 21,455
NZ_FOXY01000024.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 19,502
NZ_FOXY01000025.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 17,628
NZ_FOXY01000026.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 15,689
NZ_FOXY01000027.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 14,245
NZ_FOXY01000028.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 13,207
NZ_FOXY01000029.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 12,948
NZ_FOXY01000030.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 9,662
NZ_FOXY01000031.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 9,295
NZ_FOXY01000032.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 7,684
NZ_FOXY01000033.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 7,614
NZ_FOXY01000034.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 7,395
NZ_FOXY01000035.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 7,343
NZ_FOXY01000036.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 7,301
NZ_FOXY01000037.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 6,786
NZ_FOXY01000038.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 6,776
NZ_FOXY01000039.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 6,257
NZ_FOXY01000040.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 5,970
NZ_FOXY01000041.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 4,544
NZ_FOXY01000042.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 3,511
NZ_FOXY01000043.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 3,496
NZ_FOXY01000044.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 3,389
NZ_FOXY01000045.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 2,720
NZ_FOXY01000046.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 2,585
NZ_FOXY01000047.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 2,422
NZ_FOXY01000048.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 2,390
NZ_FOXY01000049.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 2,266
NZ_FOXY01000050.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 2,180
NZ_FOXY01000051.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 2,099
NZ_FOXY01000052.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,905
NZ_FOXY01000053.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,627
NZ_FOXY01000054.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,381
NZ_FOXY01000055.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,363
NZ_FOXY01000056.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,290
NZ_FOXY01000057.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,224
NZ_FOXY01000058.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,126
NZ_FOXY01000059.1 Donghicola eburneus strain DSM 29127, whole genome shotgun sequence 1,041

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory