fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pustulibacterium marinum CGMCC 1.12333

Genome identifier: GCF_900116665.1

NCBI assembly name: IMG-taxon 2663762752 annotated assembly

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Pustulibacterium, Pustulibacterium marinum

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Pustulibacterium, Pustulibacterium marinum

Scaffolds: 32

Genes: 3,733 Protein-coding: 3,660 RNAs: 56 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FPBK01000001.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 998,759
NZ_FPBK01000002.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 369,574
NZ_FPBK01000003.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 278,949
NZ_FPBK01000004.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 260,524
NZ_FPBK01000005.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 233,697
NZ_FPBK01000006.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 204,167
NZ_FPBK01000007.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 182,714
NZ_FPBK01000008.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 179,636
NZ_FPBK01000009.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 177,927
NZ_FPBK01000010.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 174,246
NZ_FPBK01000011.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 160,383
NZ_FPBK01000012.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 152,411
NZ_FPBK01000013.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 121,054
NZ_FPBK01000014.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 93,668
NZ_FPBK01000015.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 84,073
NZ_FPBK01000016.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 79,850
NZ_FPBK01000017.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 69,888
NZ_FPBK01000018.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 67,717
NZ_FPBK01000019.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 49,929
NZ_FPBK01000020.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 48,459
NZ_FPBK01000021.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 45,049
NZ_FPBK01000022.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 41,740
NZ_FPBK01000023.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 34,930
NZ_FPBK01000024.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 31,650
NZ_FPBK01000025.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 20,328
NZ_FPBK01000026.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 18,131
NZ_FPBK01000027.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 13,484
NZ_FPBK01000028.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 6,687
NZ_FPBK01000029.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 6,483
NZ_FPBK01000030.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 1,513
NZ_FPBK01000031.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 1,280
NZ_FPBK01000032.1 Pustulibacterium marinum strain CGMCC 1.12333, whole genome shotgun sequence 1,002

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory