fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alkalibacter saccharofermentans DSM 14828

Genome identifier: GCF_900128885.1

NCBI assembly name: IMG-taxon 2582581275 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Eubacteriales, Alkalibacteraceae, Alkalibacter, Alkalibacter saccharofermentans

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Alkalibacter, Alkalibacter saccharofermentans

Scaffolds: 35

Genes: 2,245 Protein-coding: 2,166 RNAs: 58 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQTU01000001.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 368,670
NZ_FQTU01000002.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 233,007
NZ_FQTU01000003.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 202,967
NZ_FQTU01000004.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 153,962
NZ_FQTU01000005.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 153,723
NZ_FQTU01000006.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 143,442
NZ_FQTU01000007.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 139,617
NZ_FQTU01000008.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 106,226
NZ_FQTU01000009.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 92,662
NZ_FQTU01000010.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 80,359
NZ_FQTU01000011.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 75,860
NZ_FQTU01000012.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 72,940
NZ_FQTU01000013.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 71,702
NZ_FQTU01000014.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 66,985
NZ_FQTU01000015.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 63,863
NZ_FQTU01000016.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 55,321
NZ_FQTU01000017.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 50,538
NZ_FQTU01000018.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 36,353
NZ_FQTU01000019.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 31,307
NZ_FQTU01000020.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 22,224
NZ_FQTU01000021.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 20,242
NZ_FQTU01000022.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 16,620
NZ_FQTU01000023.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 14,803
NZ_FQTU01000024.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 13,733
NZ_FQTU01000025.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 11,782
NZ_FQTU01000026.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 8,052
NZ_FQTU01000027.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 6,837
NZ_FQTU01000028.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 5,535
NZ_FQTU01000029.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 2,413
NZ_FQTU01000030.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 2,195
NZ_FQTU01000031.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 1,898
NZ_FQTU01000032.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 1,488
NZ_FQTU01000033.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 1,359
NZ_FQTU01000034.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 1,342
NZ_FQTU01000035.1 Alkalibacter saccharofermentans DSM 14828, whole genome shotgun sequence 1,338

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory