fast.genomicscompare 6,575 genera of bacteria & archaea

 

Parasphingorhabdus marina DSM 22363

Genome identifier: GCF_900128895.1

NCBI assembly name: IMG-taxon 2582580503 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Parasphingorhabdus, Parasphingorhabdus marina

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Parasphingorhabdus, Parasphingorhabdus marina

Scaffolds: 2

Genes: 3,454 Protein-coding: 3,395 RNAs: 48 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FSQW01000001.1 Parasphingorhabdus marina DSM 22363, whole genome shotgun sequence 1,962,728
NZ_FSQW01000002.1 Parasphingorhabdus marina DSM 22363, whole genome shotgun sequence 1,585,200

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory