fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudosulfitobacter pseudonitzschiae DSM 26824

Genome identifier: GCF_900129395.1

NCBI assembly name: IMG-taxon 2695420945 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pseudosulfitobacter, Pseudosulfitobacter pseudonitzschiae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Pseudosulfitobacter, Pseudosulfitobacter pseudonitzschiae

Scaffolds: 35

Genes: 4,860 Protein-coding: 4,775 RNAs: 50 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQVP01000001.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 919,963
NZ_FQVP01000002.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 751,778
NZ_FQVP01000003.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 728,083
NZ_FQVP01000004.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 580,159
NZ_FQVP01000005.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 572,883
NZ_FQVP01000006.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 250,548
NZ_FQVP01000007.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 152,900
NZ_FQVP01000008.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 138,450
NZ_FQVP01000009.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 131,106
NZ_FQVP01000010.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 117,945
NZ_FQVP01000011.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 108,257
NZ_FQVP01000012.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 88,260
NZ_FQVP01000013.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 79,746
NZ_FQVP01000014.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 73,738
NZ_FQVP01000015.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 64,361
NZ_FQVP01000016.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 32,998
NZ_FQVP01000017.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 28,747
NZ_FQVP01000018.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 25,935
NZ_FQVP01000019.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 24,003
NZ_FQVP01000020.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 18,293
NZ_FQVP01000021.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 15,371
NZ_FQVP01000022.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 9,484
NZ_FQVP01000023.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 6,893
NZ_FQVP01000024.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 6,113
NZ_FQVP01000025.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 5,321
NZ_FQVP01000026.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 4,180
NZ_FQVP01000027.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 3,493
NZ_FQVP01000028.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 3,115
NZ_FQVP01000029.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 1,766
NZ_FQVP01000030.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 1,548
NZ_FQVP01000031.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 1,458
NZ_FQVP01000032.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 1,311
NZ_FQVP01000033.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 1,210
NZ_FQVP01000034.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 1,197
NZ_FQVP01000035.1 Pseudosulfitobacter pseudonitzschiae strain DSM 26824, whole genome shotgun sequence 1,028

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory