fast.genomicscompare 6,575 genera of bacteria & archaea

 

Cognatishimia maritima DSM 28223

Genome identifier: GCF_900129685.1

NCBI assembly name: IMG-taxon 2617270829 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Cognatishimia, Cognatishimia maritima

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Cognatishimia, Cognatishimia maritima

Scaffolds: 14

Genes: 3,304 Protein-coding: 3,214 RNAs: 65 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQWM01000001.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 1,020,790
NZ_FQWM01000002.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 618,078
NZ_FQWM01000003.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 268,291
NZ_FQWM01000004.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 265,382
NZ_FQWM01000005.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 241,157
NZ_FQWM01000006.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 234,104
NZ_FQWM01000007.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 180,671
NZ_FQWM01000008.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 152,053
NZ_FQWM01000009.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 136,296
NZ_FQWM01000010.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 69,122
NZ_FQWM01000011.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 53,872
NZ_FQWM01000012.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 24,898
NZ_FQWM01000013.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 14,382
NZ_FQWM01000014.1 Cognatishimia maritima strain DSM 28223, whole genome shotgun sequence 5,819

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory