fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_T intestinale DSM 6191

Genome identifier: GCF_900130055.1

NCBI assembly name: IMG-taxon 2585428084 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Clostridium_T, Clostridium_T intestinale

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium, Clostridium intestinale

Scaffolds: 33

Genes: 4,622 Protein-coding: 4,527 RNAs: 72 pseudogenes: 23

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQXU01000001.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 1,094
NZ_FQXU01000002.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 1,504
NZ_FQXU01000003.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 680,506
NZ_FQXU01000004.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 584,521
NZ_FQXU01000005.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 559,856
NZ_FQXU01000006.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 372,065
NZ_FQXU01000007.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 368,167
NZ_FQXU01000008.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 324,765
NZ_FQXU01000009.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 271,572
NZ_FQXU01000010.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 163,345
NZ_FQXU01000011.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 158,715
NZ_FQXU01000012.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 149,280
NZ_FQXU01000013.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 119,627
NZ_FQXU01000014.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 104,436
NZ_FQXU01000015.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 89,169
NZ_FQXU01000016.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 87,446
NZ_FQXU01000017.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 85,335
NZ_FQXU01000018.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 74,314
NZ_FQXU01000019.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 73,183
NZ_FQXU01000020.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 51,989
NZ_FQXU01000021.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 46,705
NZ_FQXU01000022.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 40,765
NZ_FQXU01000023.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 35,731
NZ_FQXU01000024.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 30,512
NZ_FQXU01000025.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 28,397
NZ_FQXU01000026.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 27,391
NZ_FQXU01000027.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 25,705
NZ_FQXU01000028.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 15,790
NZ_FQXU01000029.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 13,212
NZ_FQXU01000030.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 5,868
NZ_FQXU01000031.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 4,796
NZ_FQXU01000032.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 2,553
NZ_FQXU01000033.1 Clostridium intestinale DSM 6191, whole genome shotgun sequence 2,284

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory