fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sporobacter termitidis DSM 10068

Genome identifier: GCF_900130065.1

NCBI assembly name: IMG-taxon 2585428085 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Oscillospiraceae, Sporobacter, Sporobacter termitidis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Sporobacter, Sporobacter termitidis

Scaffolds: 37

Genes: 3,895 Protein-coding: 3,815 RNAs: 60 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQXV01000001.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 750,799
NZ_FQXV01000002.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 366,364
NZ_FQXV01000003.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 338,386
NZ_FQXV01000004.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 292,457
NZ_FQXV01000005.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 266,573
NZ_FQXV01000006.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 250,213
NZ_FQXV01000007.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 245,333
NZ_FQXV01000008.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 223,036
NZ_FQXV01000009.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 202,732
NZ_FQXV01000010.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 171,470
NZ_FQXV01000011.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 167,431
NZ_FQXV01000012.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 143,729
NZ_FQXV01000013.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 133,786
NZ_FQXV01000014.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 132,574
NZ_FQXV01000015.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 80,032
NZ_FQXV01000016.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 74,000
NZ_FQXV01000017.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 72,221
NZ_FQXV01000018.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 61,969
NZ_FQXV01000019.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 49,062
NZ_FQXV01000020.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 31,189
NZ_FQXV01000021.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 29,318
NZ_FQXV01000022.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 25,278
NZ_FQXV01000023.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 19,107
NZ_FQXV01000024.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 16,884
NZ_FQXV01000025.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 10,100
NZ_FQXV01000026.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 7,678
NZ_FQXV01000027.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 6,991
NZ_FQXV01000028.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 5,957
NZ_FQXV01000029.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 5,874
NZ_FQXV01000030.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 4,320
NZ_FQXV01000031.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 3,188
NZ_FQXV01000032.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 2,931
NZ_FQXV01000033.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 1,652
NZ_FQXV01000034.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 1,626
NZ_FQXV01000035.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 1,507
NZ_FQXV01000036.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 1,440
NZ_FQXV01000037.1 Sporobacter termitidis DSM 10068, whole genome shotgun sequence 1,007

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory