fast.genomicscompare 6,575 genera of bacteria & archaea

 

Peptoclostridium litorale DSM 5388

Genome identifier: GCF_900141635.1

NCBI assembly name: IMG-taxon 2585428090 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Peptostreptococcaceae, Peptoclostridium, Peptoclostridium litorale

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Peptostreptococcaceae, Peptoclostridium, Peptoclostridium litorale

Scaffolds: 38

Genes: 2,994 Protein-coding: 2,911 RNAs: 61 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FSRH01000001.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 381,136
NZ_FSRH01000002.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 309,275
NZ_FSRH01000003.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 278,597
NZ_FSRH01000004.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 267,222
NZ_FSRH01000005.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 213,504
NZ_FSRH01000006.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 196,754
NZ_FSRH01000007.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 193,885
NZ_FSRH01000008.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 144,631
NZ_FSRH01000009.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 142,591
NZ_FSRH01000010.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 140,891
NZ_FSRH01000011.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 130,412
NZ_FSRH01000012.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 109,197
NZ_FSRH01000013.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 100,061
NZ_FSRH01000014.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 98,873
NZ_FSRH01000015.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 84,936
NZ_FSRH01000016.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 83,279
NZ_FSRH01000017.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 60,926
NZ_FSRH01000018.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 56,276
NZ_FSRH01000019.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 45,516
NZ_FSRH01000020.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 31,849
NZ_FSRH01000021.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 29,614
NZ_FSRH01000022.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 27,960
NZ_FSRH01000023.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 15,380
NZ_FSRH01000024.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 10,235
NZ_FSRH01000025.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 8,348
NZ_FSRH01000026.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 5,605
NZ_FSRH01000027.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 5,242
NZ_FSRH01000028.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 4,989
NZ_FSRH01000029.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 4,885
NZ_FSRH01000030.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 2,588
NZ_FSRH01000031.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 2,479
NZ_FSRH01000032.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 1,692
NZ_FSRH01000033.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 1,689
NZ_FSRH01000034.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 1,654
NZ_FSRH01000035.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 1,598
NZ_FSRH01000036.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 1,534
NZ_FSRH01000037.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 1,234
NZ_FSRH01000038.1 Peptoclostridium litorale DSM 5388, whole genome shotgun sequence 1,080

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory