fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arenitalea lutea CGMCC 1.12213

Genome identifier: GCF_900141715.1

NCBI assembly name: IMG-taxon 2667528186 annotated assembly

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Arenitalea, Arenitalea lutea

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Algibacter, Algibacter luteus

Scaffolds: 18

Genes: 2,997 Protein-coding: 2,942 RNAs: 46 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQYK01000001.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 835,368
NZ_FQYK01000002.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 565,374
NZ_FQYK01000003.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 539,645
NZ_FQYK01000004.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 367,171
NZ_FQYK01000005.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 329,943
NZ_FQYK01000006.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 163,196
NZ_FQYK01000007.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 145,786
NZ_FQYK01000008.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 118,311
NZ_FQYK01000009.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 89,270
NZ_FQYK01000010.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 81,684
NZ_FQYK01000011.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 54,023
NZ_FQYK01000012.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 38,267
NZ_FQYK01000013.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 32,995
NZ_FQYK01000014.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 6,964
NZ_FQYK01000015.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 3,062
NZ_FQYK01000016.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 2,713
NZ_FQYK01000017.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 2,376
NZ_FQYK01000018.1 Algibacter luteus strain CGMCC 1.12213, whole genome shotgun sequence 1,783

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory