fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_AG cavendishii DSM 21758

Genome identifier: GCF_900141845.1

NCBI assembly name: IMG-taxon 2585428089 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Clostridiales, Clostridiaceae, Clostridium_AG, Clostridium_AG cavendishii

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium, Clostridium cavendishii

Scaffolds: 56

Genes: 4,599 Protein-coding: 4,472 RNAs: 86 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQZB01000001.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,349
NZ_FQZB01000002.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,481
NZ_FQZB01000003.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 442,894
NZ_FQZB01000004.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 424,524
NZ_FQZB01000005.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 421,249
NZ_FQZB01000006.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 348,272
NZ_FQZB01000007.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 319,201
NZ_FQZB01000008.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 299,504
NZ_FQZB01000009.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 284,556
NZ_FQZB01000010.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 270,640
NZ_FQZB01000011.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 268,248
NZ_FQZB01000012.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 255,088
NZ_FQZB01000013.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 236,475
NZ_FQZB01000014.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 206,882
NZ_FQZB01000015.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 163,516
NZ_FQZB01000016.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 138,188
NZ_FQZB01000017.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 100,378
NZ_FQZB01000018.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 86,037
NZ_FQZB01000019.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 81,932
NZ_FQZB01000020.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 81,820
NZ_FQZB01000021.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 78,569
NZ_FQZB01000022.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 77,367
NZ_FQZB01000023.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 68,512
NZ_FQZB01000024.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 67,844
NZ_FQZB01000025.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 36,602
NZ_FQZB01000026.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 35,023
NZ_FQZB01000027.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 29,459
NZ_FQZB01000028.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 28,730
NZ_FQZB01000029.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 16,851
NZ_FQZB01000030.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 15,311
NZ_FQZB01000031.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 12,194
NZ_FQZB01000032.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 9,711
NZ_FQZB01000033.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 8,060
NZ_FQZB01000034.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 6,584
NZ_FQZB01000035.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 9,357
NZ_FQZB01000036.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 6,311
NZ_FQZB01000037.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 4,574
NZ_FQZB01000038.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 4,343
NZ_FQZB01000039.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 4,031
NZ_FQZB01000040.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 3,695
NZ_FQZB01000041.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 3,360
NZ_FQZB01000042.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 3,038
NZ_FQZB01000043.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 2,864
NZ_FQZB01000044.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 2,616
NZ_FQZB01000045.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 2,424
NZ_FQZB01000046.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 2,313
NZ_FQZB01000047.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,977
NZ_FQZB01000048.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,966
NZ_FQZB01000049.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,907
NZ_FQZB01000050.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,822
NZ_FQZB01000051.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,659
NZ_FQZB01000052.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,582
NZ_FQZB01000053.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,319
NZ_FQZB01000054.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,234
NZ_FQZB01000055.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,190
NZ_FQZB01000056.1 Clostridium cavendishii DSM 21758, whole genome shotgun sequence 1,033

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory