fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudozobellia thermophila DSM 19858

Genome identifier: GCF_900141855.1

NCBI assembly name: IMG-taxon 2622736519 annotated assembly

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Pseudozobellia, Pseudozobellia thermophila

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Pseudozobellia, Pseudozobellia thermophila

Scaffolds: 36

Genes: 4,199 Protein-coding: 4,131 RNAs: 50 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQYU01000001.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,274,834
NZ_FQYU01000002.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,149,882
NZ_FQYU01000003.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 475,669
NZ_FQYU01000004.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 335,218
NZ_FQYU01000005.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 279,649
NZ_FQYU01000006.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 275,868
NZ_FQYU01000007.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 202,236
NZ_FQYU01000008.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 157,123
NZ_FQYU01000009.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 148,154
NZ_FQYU01000010.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 122,019
NZ_FQYU01000011.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 114,784
NZ_FQYU01000012.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 105,606
NZ_FQYU01000013.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 76,223
NZ_FQYU01000014.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 54,434
NZ_FQYU01000015.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 52,403
NZ_FQYU01000016.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 40,078
NZ_FQYU01000017.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 37,720
NZ_FQYU01000018.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 31,839
NZ_FQYU01000019.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 29,044
NZ_FQYU01000020.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 19,765
NZ_FQYU01000021.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 15,264
NZ_FQYU01000022.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 7,952
NZ_FQYU01000023.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 7,117
NZ_FQYU01000024.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 5,897
NZ_FQYU01000025.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 2,703
NZ_FQYU01000026.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 2,110
NZ_FQYU01000027.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,834
NZ_FQYU01000028.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,649
NZ_FQYU01000029.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,586
NZ_FQYU01000030.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,497
NZ_FQYU01000031.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,189
NZ_FQYU01000032.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,164
NZ_FQYU01000033.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,131
NZ_FQYU01000034.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,107
NZ_FQYU01000035.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,053
NZ_FQYU01000036.1 Pseudozobellia thermophila strain DSM 19858, whole genome shotgun sequence 1,016

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory