fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aureimonas altamirensis DSM 21988

Genome identifier: GCF_900141975.1

NCBI assembly name: IMG-taxon 2585427611 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Aureimonas, Aureimonas altamirensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Aurantimonadaceae, Aureimonas, Aureimonas altamirensis

Scaffolds: 11

Genes: 4,027 Protein-coding: 3,937 RNAs: 61 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQZC01000001.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 1,262,608
NZ_FQZC01000002.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 1,054,710
NZ_FQZC01000003.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 751,587
NZ_FQZC01000004.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 674,132
NZ_FQZC01000005.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 358,910
NZ_FQZC01000006.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 72,821
NZ_FQZC01000007.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 5,562
NZ_FQZC01000008.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 4,788
NZ_FQZC01000009.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 3,078
NZ_FQZC01000010.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 1,708
NZ_FQZC01000011.1 Aureimonas altamirensis DSM 21988, whole genome shotgun sequence 1,061

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory