fast.genomicscompare 6,575 genera of bacteria & archaea

 

Malonomonas rubra DSM 5091

Genome identifier: GCF_900142125.1

NCBI assembly name: IMG-taxon 2585428155 annotated assembly

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, Geopsychrobacteraceae, Malonomonas, Malonomonas rubra

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Geopsychrobacteraceae, Malonomonas, Malonomonas rubra

Scaffolds: 42

Genes: 3,703 Protein-coding: 3,628 RNAs: 55 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FQZT01000001.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 622,975
NZ_FQZT01000002.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 477,835
NZ_FQZT01000003.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 373,963
NZ_FQZT01000004.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 305,308
NZ_FQZT01000005.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 286,605
NZ_FQZT01000006.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 233,192
NZ_FQZT01000007.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 216,851
NZ_FQZT01000008.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 157,508
NZ_FQZT01000009.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 148,427
NZ_FQZT01000010.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 140,545
NZ_FQZT01000011.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 119,494
NZ_FQZT01000012.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 99,273
NZ_FQZT01000013.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 74,406
NZ_FQZT01000014.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 72,443
NZ_FQZT01000015.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 64,843
NZ_FQZT01000016.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 57,018
NZ_FQZT01000017.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 48,589
NZ_FQZT01000018.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 44,326
NZ_FQZT01000019.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 39,446
NZ_FQZT01000020.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 33,154
NZ_FQZT01000021.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 32,867
NZ_FQZT01000022.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 31,343
NZ_FQZT01000023.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 31,060
NZ_FQZT01000024.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 31,045
NZ_FQZT01000025.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 30,236
NZ_FQZT01000026.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 29,003
NZ_FQZT01000027.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 27,819
NZ_FQZT01000028.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 21,625
NZ_FQZT01000029.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 21,304
NZ_FQZT01000030.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 16,468
NZ_FQZT01000031.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 14,639
NZ_FQZT01000032.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 11,731
NZ_FQZT01000033.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 11,174
NZ_FQZT01000034.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 10,376
NZ_FQZT01000035.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 6,493
NZ_FQZT01000036.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 4,537
NZ_FQZT01000037.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 3,760
NZ_FQZT01000038.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 3,649
NZ_FQZT01000039.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 2,456
NZ_FQZT01000040.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 1,350
NZ_FQZT01000041.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 1,333
NZ_FQZT01000042.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence 1,162

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory