fast.genomicscompare 6,575 genera of bacteria & archaea

 

Vannielia litorea DSM 29440

Genome identifier: GCF_900142295.1

NCBI assembly name: IMG-taxon 2698536701 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Vannielia, Vannielia litorea

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Vannielia, Vannielia litorea

Scaffolds: 3

Genes: 4,094 Protein-coding: 4,029 RNAs: 49 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FSRL01000001.1 Vannielia litorea strain DSM 29440, whole genome shotgun sequence 3,644,082
NZ_FSRL01000002.1 Vannielia litorea strain DSM 29440, whole genome shotgun sequence 450,201
NZ_FSRL01000003.1 Vannielia litorea strain DSM 29440, whole genome shotgun sequence 1,179

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory