fast.genomicscompare 6,575 genera of bacteria & archaea

 

Leptospira interrogans ATCC 43642

Genome identifier: GCF_900156205.1

NCBI assembly name: IMG-taxon 2681812812 annotated assembly

GTDB taxonomy: Bacteria, Spirochaetota, Leptospirae, Leptospirales, Leptospiraceae, Leptospira, Leptospira interrogans

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Leptospirales, Leptospiraceae, Leptospira, Leptospira interrogans

Scaffolds: 57

Genes: 3,782 Protein-coding: 3,611 RNAs: 47 pseudogenes: 124

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FTNA01000001.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 350,340
NZ_FTNA01000002.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 319,667
NZ_FTNA01000003.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 283,696
NZ_FTNA01000004.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 276,244
NZ_FTNA01000005.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 242,548
NZ_FTNA01000006.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 217,214
NZ_FTNA01000007.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 201,038
NZ_FTNA01000008.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 183,514
NZ_FTNA01000009.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 137,288
NZ_FTNA01000010.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 133,191
NZ_FTNA01000011.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 132,448
NZ_FTNA01000012.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 123,642
NZ_FTNA01000013.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 108,488
NZ_FTNA01000014.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 108,189
NZ_FTNA01000015.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 106,438
NZ_FTNA01000016.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 96,171
NZ_FTNA01000017.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 91,376
NZ_FTNA01000018.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 90,190
NZ_FTNA01000019.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 85,680
NZ_FTNA01000020.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 83,033
NZ_FTNA01000021.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 79,293
NZ_FTNA01000022.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 64,631
NZ_FTNA01000023.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 60,941
NZ_FTNA01000024.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 60,244
NZ_FTNA01000025.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 58,789
NZ_FTNA01000026.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 58,061
NZ_FTNA01000027.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 55,462
NZ_FTNA01000028.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 46,722
NZ_FTNA01000029.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 45,510
NZ_FTNA01000030.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 45,417
NZ_FTNA01000031.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 45,046
NZ_FTNA01000032.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 44,513
NZ_FTNA01000033.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 43,252
NZ_FTNA01000034.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 41,763
NZ_FTNA01000035.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 41,147
NZ_FTNA01000036.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 40,313
NZ_FTNA01000037.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 39,457
NZ_FTNA01000038.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 38,734
NZ_FTNA01000039.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 37,018
NZ_FTNA01000040.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 32,625
NZ_FTNA01000041.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 31,157
NZ_FTNA01000042.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 30,011
NZ_FTNA01000043.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 26,919
NZ_FTNA01000044.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 26,445
NZ_FTNA01000045.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 26,347
NZ_FTNA01000046.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 22,440
NZ_FTNA01000047.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 19,058
NZ_FTNA01000048.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 18,543
NZ_FTNA01000049.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 10,553
NZ_FTNA01000050.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 7,748
NZ_FTNA01000051.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 6,379
NZ_FTNA01000052.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 5,399
NZ_FTNA01000053.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 5,107
NZ_FTNA01000054.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 2,803
NZ_FTNA01000055.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 2,508
NZ_FTNA01000056.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 2,286
NZ_FTNA01000057.1 Leptospira interrogans strain ATCC 43642, whole genome shotgun sequence 1,634

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory