fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pontibaca methylaminivorans DSM 21219

Genome identifier: GCF_900156525.1

NCBI assembly name: IMG-taxon 2681812934 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pontibaca, Pontibaca methylaminivorans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Pontibaca, Pontibaca methylaminivorans

Scaffolds: 8

Genes: 2,601 Protein-coding: 2,514 RNAs: 46 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FTPS01000001.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 2,339,020
NZ_FTPS01000002.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 169,744
NZ_FTPS01000003.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 82,014
NZ_FTPS01000004.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 39,574
NZ_FTPS01000005.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 7,372
NZ_FTPS01000006.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 7,063
NZ_FTPS01000007.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 4,971
NZ_FTPS01000008.1 Pontibaca methylaminivorans strain DSM 21219, whole genome shotgun sequence 1,226

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory