fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bieblia_A vinaykumarii DSM 18714

Genome identifier: GCF_900156695.1

NCBI assembly name: IMG-taxon 2681813513 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Bieblia_A, Bieblia_A vinaykumarii

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Phaeovulum, Phaeovulum vinaykumarii

Scaffolds: 27

Genes: 3,318 Protein-coding: 3,204 RNAs: 52 pseudogenes: 62

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FTOM01000001.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 927,645
NZ_FTOM01000002.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 813,265
NZ_FTOM01000003.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 306,760
NZ_FTOM01000004.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 265,147
NZ_FTOM01000005.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 219,558
NZ_FTOM01000006.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 183,190
NZ_FTOM01000007.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 180,313
NZ_FTOM01000008.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 146,567
NZ_FTOM01000009.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 115,607
NZ_FTOM01000010.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 87,016
NZ_FTOM01000011.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 59,395
NZ_FTOM01000012.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 36,611
NZ_FTOM01000013.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 36,571
NZ_FTOM01000014.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 27,574
NZ_FTOM01000015.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 15,639
NZ_FTOM01000016.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 14,858
NZ_FTOM01000017.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 14,562
NZ_FTOM01000018.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 5,550
NZ_FTOM01000019.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 5,541
NZ_FTOM01000020.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 4,718
NZ_FTOM01000021.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 3,233
NZ_FTOM01000022.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 3,363
NZ_FTOM01000023.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 2,112
NZ_FTOM01000024.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 2,062
NZ_FTOM01000025.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 1,955
NZ_FTOM01000026.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 1,781
NZ_FTOM01000027.1 Phaeovulum vinaykumarii strain DSM 18714, whole genome shotgun sequence 1,091

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory