fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marseille-P3160 sp900162725 Marseille-P3160T

Genome identifier: GCF_900162725.1

NCBI assembly name: PRJEB18272

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, Marseille-P3160, Marseille-P3160 sp900162725

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, Parabacteroides

Scaffolds: 5

Genes: 3,747 Protein-coding: 3,591 RNAs: 65 pseudogenes: 91

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LT799414.1 Parabacteroides sp. Marseille-P3160 strain Marseille-P3160T, whole genome shotgun sequence 819
NZ_LT799415.1 Parabacteroides sp. Marseille-P3160 strain Marseille-P3160T, whole genome shotgun sequence 1,143
NZ_LT799416.1 Parabacteroides sp. Marseille-P3160 strain Marseille-P3160T, whole genome shotgun sequence 965
NZ_LT799417.1 Parabacteroides sp. Marseille-P3160 strain Marseille-P3160T, whole genome shotgun sequence 1,135
NZ_LT799418.1 Parabacteroides sp. Marseille-P3160 strain Marseille-P3160T, whole genome shotgun sequence 4,757,230

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory