fast.genomicscompare 6,575 genera of bacteria & archaea

 

Eubacterium_Q ruminantium ATCC 17233

Genome identifier: GCF_900167085.1

NCBI assembly name: IMG-taxon 2585428142 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Eubacterium_Q, Eubacterium_Q ruminantium

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Eubacterium, Eubacterium ruminantium

Scaffolds: 34

Genes: 2,564 Protein-coding: 2,491 RNAs: 53 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FUXA01000001.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 576
NZ_FUXA01000002.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 643
NZ_FUXA01000003.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 334,691
NZ_FUXA01000004.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 333,984
NZ_FUXA01000005.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 327,693
NZ_FUXA01000006.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 311,432
NZ_FUXA01000007.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 255,420
NZ_FUXA01000008.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 243,701
NZ_FUXA01000009.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 181,556
NZ_FUXA01000010.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 130,281
NZ_FUXA01000011.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 125,770
NZ_FUXA01000012.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 93,234
NZ_FUXA01000013.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 80,113
NZ_FUXA01000014.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 71,632
NZ_FUXA01000015.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 59,729
NZ_FUXA01000016.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 47,707
NZ_FUXA01000017.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 45,831
NZ_FUXA01000018.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 38,414
NZ_FUXA01000019.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 21,971
NZ_FUXA01000020.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 21,512
NZ_FUXA01000021.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 15,851
NZ_FUXA01000022.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 15,792
NZ_FUXA01000023.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 14,193
NZ_FUXA01000024.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 13,946
NZ_FUXA01000025.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 13,002
NZ_FUXA01000026.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 11,344
NZ_FUXA01000027.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 7,806
NZ_FUXA01000028.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 6,443
NZ_FUXA01000029.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 5,052
NZ_FUXA01000030.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 4,802
NZ_FUXA01000031.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 2,436
NZ_FUXA01000032.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 1,908
NZ_FUXA01000033.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 1,349
NZ_FUXA01000034.1 Eubacterium ruminantium strain ATCC 17233, whole genome shotgun sequence 1,287

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory