fast.genomicscompare 6,575 genera of bacteria & archaea

 

Selenihalanaerobacter shriftii ATCC BAA-73

Genome identifier: GCF_900167185.1

NCBI assembly name: IMG-taxon 2582581323 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_F, Halanaerobiia, Halobacteroidales, Acetohalobiaceae, Selenihalanaerobacter, Selenihalanaerobacter shriftii

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Halanaerobiales, Halobacteroidaceae, Selenihalanaerobacter, Selenihalanaerobacter shriftii

Scaffolds: 54

Genes: 2,825 Protein-coding: 2,723 RNAs: 76 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FUWM01000001.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 661
NZ_FUWM01000002.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 357
NZ_FUWM01000003.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 284,461
NZ_FUWM01000004.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 210,663
NZ_FUWM01000005.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 208,594
NZ_FUWM01000006.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 205,157
NZ_FUWM01000007.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 157,430
NZ_FUWM01000008.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 143,885
NZ_FUWM01000009.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 131,449
NZ_FUWM01000010.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 125,861
NZ_FUWM01000011.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 124,574
NZ_FUWM01000012.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 94,443
NZ_FUWM01000013.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 89,969
NZ_FUWM01000014.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 84,671
NZ_FUWM01000015.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 78,424
NZ_FUWM01000016.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 77,400
NZ_FUWM01000017.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 76,777
NZ_FUWM01000018.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 74,968
NZ_FUWM01000019.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 70,694
NZ_FUWM01000020.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 60,789
NZ_FUWM01000021.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 56,021
NZ_FUWM01000022.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 38,478
NZ_FUWM01000023.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 34,509
NZ_FUWM01000024.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 32,091
NZ_FUWM01000025.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 31,859
NZ_FUWM01000026.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 31,325
NZ_FUWM01000027.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 27,973
NZ_FUWM01000028.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 27,330
NZ_FUWM01000029.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 26,475
NZ_FUWM01000030.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 25,487
NZ_FUWM01000031.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 21,628
NZ_FUWM01000032.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 19,069
NZ_FUWM01000033.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 17,868
NZ_FUWM01000034.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 16,968
NZ_FUWM01000035.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 14,636
NZ_FUWM01000036.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 14,285
NZ_FUWM01000037.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 14,084
NZ_FUWM01000038.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 13,370
NZ_FUWM01000039.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 12,796
NZ_FUWM01000040.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 10,639
NZ_FUWM01000041.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 10,214
NZ_FUWM01000042.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 6,645
NZ_FUWM01000043.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 6,173
NZ_FUWM01000044.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 6,162
NZ_FUWM01000045.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 3,907
NZ_FUWM01000046.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 3,349
NZ_FUWM01000047.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 3,033
NZ_FUWM01000048.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 2,724
NZ_FUWM01000049.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 2,164
NZ_FUWM01000050.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 2,091
NZ_FUWM01000051.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 1,744
NZ_FUWM01000052.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 1,722
NZ_FUWM01000053.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 1,484
NZ_FUWM01000054.1 Selenihalanaerobacter shriftii strain ATCC BAA-73, whole genome shotgun sequence 1,054

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory