fast.genomicscompare 6,575 genera of bacteria & archaea

 

Eubacterium_R coprostanoligenes ATCC 51222

Genome identifier: GCF_900167205.1

NCBI assembly name: IMG-taxon 2585428093 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Acutalibacteraceae, Eubacterium_R, Eubacterium_R coprostanoligenes

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Eubacterium, Eubacterium coprostanoligenes

Scaffolds: 36

Genes: 1,721 Protein-coding: 1,652 RNAs: 58 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FUWW01000001.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 183,304
NZ_FUWW01000002.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 174,648
NZ_FUWW01000003.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 149,815
NZ_FUWW01000004.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 134,264
NZ_FUWW01000005.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 124,946
NZ_FUWW01000006.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 96,747
NZ_FUWW01000007.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 91,496
NZ_FUWW01000008.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 87,653
NZ_FUWW01000009.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 76,233
NZ_FUWW01000010.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 75,078
NZ_FUWW01000011.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 73,285
NZ_FUWW01000012.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 67,147
NZ_FUWW01000013.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 61,763
NZ_FUWW01000014.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 50,661
NZ_FUWW01000015.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 43,843
NZ_FUWW01000016.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 42,824
NZ_FUWW01000017.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 41,710
NZ_FUWW01000018.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 36,789
NZ_FUWW01000019.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 32,771
NZ_FUWW01000020.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 27,877
NZ_FUWW01000021.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 27,769
NZ_FUWW01000022.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 27,118
NZ_FUWW01000023.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 24,262
NZ_FUWW01000024.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 10,940
NZ_FUWW01000025.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 10,006
NZ_FUWW01000026.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 8,388
NZ_FUWW01000027.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 7,389
NZ_FUWW01000028.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 6,222
NZ_FUWW01000029.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 6,040
NZ_FUWW01000030.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 5,630
NZ_FUWW01000031.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 4,963
NZ_FUWW01000032.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 3,756
NZ_FUWW01000033.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 3,055
NZ_FUWW01000034.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 2,295
NZ_FUWW01000035.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 1,663
NZ_FUWW01000036.1 Eubacterium coprostanoligenes strain ATCC 51222, whole genome shotgun sequence 1,084

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory