fast.genomicscompare 6,575 genera of bacteria & archaea

 

Harryflintia acetispora Marseille-P2780

Genome identifier: GCF_900169495.1

NCBI assembly name: PRJEB19965

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Harryflintia, Harryflintia acetispora

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Provencibacterium, Provencibacterium massiliense

Scaffolds: 12

Genes: 2,967 Protein-coding: 2,884 RNAs: 66 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FWCH01000001.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 5,757
NZ_FWCH01000002.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 3,474
NZ_FWCH01000003.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 35,667
NZ_FWCH01000004.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 1,921
NZ_FWCH01000005.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 2,386
NZ_FWCH01000006.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 11,168
NZ_FWCH01000007.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 107,815
NZ_FWCH01000008.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 126,268
NZ_FWCH01000009.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 222,417
NZ_FWCH01000010.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 278,415
NZ_FWCH01000011.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 273,762
NZ_FWCH01000012.1 Provencibacterium massiliense strain Marseille-P2780, whole genome shotgun sequence 2,015,177

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory