fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudoruegeria aquimaris CECT 7680

Genome identifier: GCF_900172235.1

NCBI assembly name: Ps.aquimaris_CECT7680_Spades_Prokka

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pseudoruegeria, Pseudoruegeria aquimaris

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Pseudoruegeria, Pseudoruegeria aquimaris

Scaffolds: 60

Genes: 3,714 Protein-coding: 3,630 RNAs: 54 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FWFQ01000001.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 293,886
NZ_FWFQ01000002.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 291,784
NZ_FWFQ01000003.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 216,974
NZ_FWFQ01000004.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 174,925
NZ_FWFQ01000005.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 151,962
NZ_FWFQ01000006.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 151,580
NZ_FWFQ01000007.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 147,600
NZ_FWFQ01000008.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 147,366
NZ_FWFQ01000009.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 126,981
NZ_FWFQ01000010.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 124,682
NZ_FWFQ01000011.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 114,539
NZ_FWFQ01000012.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 110,938
NZ_FWFQ01000013.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 110,543
NZ_FWFQ01000014.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 98,253
NZ_FWFQ01000015.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 97,810
NZ_FWFQ01000016.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 97,153
NZ_FWFQ01000017.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 94,406
NZ_FWFQ01000018.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 83,860
NZ_FWFQ01000019.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 79,060
NZ_FWFQ01000020.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 64,730
NZ_FWFQ01000021.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 63,881
NZ_FWFQ01000022.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 62,267
NZ_FWFQ01000023.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 57,563
NZ_FWFQ01000024.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 54,307
NZ_FWFQ01000025.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 53,782
NZ_FWFQ01000026.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 46,042
NZ_FWFQ01000027.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 44,273
NZ_FWFQ01000028.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 38,711
NZ_FWFQ01000029.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 36,740
NZ_FWFQ01000030.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 36,658
NZ_FWFQ01000031.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 33,516
NZ_FWFQ01000032.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 30,875
NZ_FWFQ01000033.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 30,375
NZ_FWFQ01000034.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 28,877
NZ_FWFQ01000035.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 26,066
NZ_FWFQ01000036.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 24,606
NZ_FWFQ01000037.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 24,491
NZ_FWFQ01000038.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 23,620
NZ_FWFQ01000039.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 23,081
NZ_FWFQ01000040.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 19,666
NZ_FWFQ01000041.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 15,998
NZ_FWFQ01000042.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 14,682
NZ_FWFQ01000043.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 14,611
NZ_FWFQ01000044.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 14,455
NZ_FWFQ01000045.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 13,215
NZ_FWFQ01000046.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 11,444
NZ_FWFQ01000047.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 10,942
NZ_FWFQ01000048.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 10,869
NZ_FWFQ01000049.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 9,921
NZ_FWFQ01000050.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 9,128
NZ_FWFQ01000051.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 6,317
NZ_FWFQ01000052.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 5,557
NZ_FWFQ01000053.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 5,513
NZ_FWFQ01000054.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 2,939
NZ_FWFQ01000055.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 2,712
NZ_FWFQ01000056.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 1,253
NZ_FWFQ01000057.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 794
NZ_FWFQ01000058.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 777
NZ_FWFQ01000059.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 743
NZ_FWFQ01000060.1 Pseudoruegeria aquimaris strain CECT 7680, whole genome shotgun sequence 715

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory