fast.genomicscompare 6,575 genera of bacteria & archaea

 

Palleronia marisminoris CECT 7066

Genome identifier: GCF_900172315.1

NCBI assembly name: P.marisminoris_CECT7066_Spades_Prokka

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Palleronia, Palleronia marisminoris

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Palleronia, Palleronia marisminoris

Scaffolds: 33

Genes: 3,729 Protein-coding: 3,614 RNAs: 52 pseudogenes: 63

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FWFV01000001.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 752,518
NZ_FWFV01000002.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 496,243
NZ_FWFV01000003.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 357,769
NZ_FWFV01000004.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 321,249
NZ_FWFV01000005.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 305,112
NZ_FWFV01000006.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 243,157
NZ_FWFV01000007.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 219,919
NZ_FWFV01000008.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 196,843
NZ_FWFV01000009.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 170,487
NZ_FWFV01000010.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 104,181
NZ_FWFV01000011.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 84,838
NZ_FWFV01000012.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 71,393
NZ_FWFV01000013.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 63,001
NZ_FWFV01000014.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 58,724
NZ_FWFV01000015.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 52,877
NZ_FWFV01000016.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 50,411
NZ_FWFV01000017.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 49,920
NZ_FWFV01000018.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 48,647
NZ_FWFV01000019.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 27,645
NZ_FWFV01000020.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 26,075
NZ_FWFV01000021.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 14,794
NZ_FWFV01000022.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 8,215
NZ_FWFV01000023.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 5,922
NZ_FWFV01000024.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 5,513
NZ_FWFV01000025.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 4,165
NZ_FWFV01000026.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 2,687
NZ_FWFV01000027.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 1,413
NZ_FWFV01000028.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 1,378
NZ_FWFV01000029.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 1,210
NZ_FWFV01000030.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 1,132
NZ_FWFV01000031.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 1,091
NZ_FWFV01000032.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 1,040
NZ_FWFV01000033.1 Palleronia marisminoris strain CECT 7066, whole genome shotgun sequence 895

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory