fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aquimixticola soesokkakensis CECT 8620

Genome identifier: GCF_900172375.1

NCBI assembly name: A.soesokkakensis_CECT8620_Spades_Prokka

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Aquimixticola, Aquimixticola soesokkakensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Aquimixticola, Aquimixticola soesokkakensis

Scaffolds: 32

Genes: 3,356 Protein-coding: 3,266 RNAs: 54 pseudogenes: 36

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FWFS01000001.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 617,776
NZ_FWFS01000002.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 300,070
NZ_FWFS01000003.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 285,054
NZ_FWFS01000004.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 278,819
NZ_FWFS01000005.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 264,700
NZ_FWFS01000006.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 255,883
NZ_FWFS01000007.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 244,396
NZ_FWFS01000008.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 238,344
NZ_FWFS01000009.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 214,167
NZ_FWFS01000010.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 199,042
NZ_FWFS01000011.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 164,400
NZ_FWFS01000012.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 138,348
NZ_FWFS01000013.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 89,793
NZ_FWFS01000014.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 80,415
NZ_FWFS01000015.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 44,420
NZ_FWFS01000016.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 22,221
NZ_FWFS01000017.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 16,712
NZ_FWFS01000018.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 9,270
NZ_FWFS01000019.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 6,443
NZ_FWFS01000020.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 5,513
NZ_FWFS01000021.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 2,457
NZ_FWFS01000022.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 2,361
NZ_FWFS01000023.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 1,599
NZ_FWFS01000024.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 1,368
NZ_FWFS01000025.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 1,348
NZ_FWFS01000026.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 1,228
NZ_FWFS01000027.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 841
NZ_FWFS01000028.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 818
NZ_FWFS01000029.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 814
NZ_FWFS01000030.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 758
NZ_FWFS01000031.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 751
NZ_FWFS01000032.1 Aquimixticola soesokkakensis strain CECT 8620, whole genome shotgun sequence 618

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory