fast.genomicscompare 6,575 genera of bacteria & archaea

 

Papillibacter cinnamivorans DSM 12816

Genome identifier: GCF_900176335.1

NCBI assembly name: IMG-taxon 2588254267 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Oscillospiraceae, Papillibacter, Papillibacter cinnamivorans

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Papillibacter, Papillibacter cinnamivorans

Scaffolds: 20

Genes: 2,733 Protein-coding: 2,655 RNAs: 62 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FWXW01000001.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 591,463
NZ_FWXW01000002.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 423,394
NZ_FWXW01000003.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 411,659
NZ_FWXW01000004.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 348,713
NZ_FWXW01000005.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 290,668
NZ_FWXW01000006.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 176,842
NZ_FWXW01000007.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 137,025
NZ_FWXW01000008.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 85,997
NZ_FWXW01000009.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 80,314
NZ_FWXW01000010.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 78,369
NZ_FWXW01000011.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 73,248
NZ_FWXW01000012.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 69,993
NZ_FWXW01000013.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 36,146
NZ_FWXW01000014.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 29,651
NZ_FWXW01000015.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 25,253
NZ_FWXW01000016.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 9,472
NZ_FWXW01000017.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 9,010
NZ_FWXW01000018.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 8,596
NZ_FWXW01000019.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 3,088
NZ_FWXW01000020.1 Papillibacter cinnamivorans DSM 12816, whole genome shotgun sequence 1,709

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory