fast.genomicscompare 6,575 genera of bacteria & archaea

 

Actibacterium_A lipolyticum CECT 8621

Genome identifier: GCF_900184935.1

NCBI assembly name: C.lipolyticum_CECT8621_Spades_Prokka

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Actibacterium_A, Actibacterium_A lipolyticum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Actibacterium, Actibacterium lipolyticum

Scaffolds: 11

Genes: 3,781 Protein-coding: 3,705 RNAs: 55 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FXYE01000001.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 1,745,820
NZ_FXYE01000002.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 1,745,064
NZ_FXYE01000003.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 123,356
NZ_FXYE01000004.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 119,263
NZ_FXYE01000005.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 115,937
NZ_FXYE01000006.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 7,660
NZ_FXYE01000007.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 7,492
NZ_FXYE01000008.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 5,303
NZ_FXYE01000009.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 5,513
NZ_FXYE01000010.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 1,464
NZ_FXYE01000011.1 Actibacterium lipolyticum strain CECT 8621, whole genome shotgun sequence 868

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory