fast.genomicscompare 6,575 genera of bacteria & archaea

 

Anaerotruncus massiliensis_A Marseille-P3646

Genome identifier: GCF_900186535.1

NCBI assembly name: PRJEB21316

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Anaerotruncus, Anaerotruncus massiliensis_A

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Marasmitruncus, Marasmitruncus massiliensis

Scaffolds: 5

Genes: 3,632 Protein-coding: 3,523 RNAs: 63 pseudogenes: 46

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FYDE01000001.1 Marasmitruncus massiliensis strain Marseille-P3646, whole genome shotgun sequence 82,711
NZ_FYDE01000002.1 Marasmitruncus massiliensis strain Marseille-P3646, whole genome shotgun sequence 157,201
NZ_FYDE01000003.1 Marasmitruncus massiliensis strain Marseille-P3646, whole genome shotgun sequence 559,257
NZ_FYDE01000004.1 Marasmitruncus massiliensis strain Marseille-P3646, whole genome shotgun sequence 876,947
NZ_FYDE01000005.1 Marasmitruncus massiliensis strain Marseille-P3646, whole genome shotgun sequence 2,085,676

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory