fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhodoblastus acidophilus DSM 137

Genome identifier: GCF_900187365.1

NCBI assembly name: IMG-taxon 2724679731 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, Rhodoblastus, Rhodoblastus acidophilus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Beijerinckiaceae, Rhodoblastus, Rhodoblastus acidophilus

Scaffolds: 74

Genes: 4,545 Protein-coding: 4,391 RNAs: 59 pseudogenes: 95

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FYDG01000001.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,219,834
NZ_FYDG01000002.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 644,661
NZ_FYDG01000003.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 350,346
NZ_FYDG01000004.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 348,697
NZ_FYDG01000005.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 247,746
NZ_FYDG01000006.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 189,938
NZ_FYDG01000007.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 158,189
NZ_FYDG01000008.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 147,771
NZ_FYDG01000009.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 137,856
NZ_FYDG01000010.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 120,246
NZ_FYDG01000011.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 112,650
NZ_FYDG01000012.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 102,316
NZ_FYDG01000013.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 97,856
NZ_FYDG01000014.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 86,958
NZ_FYDG01000015.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 65,037
NZ_FYDG01000016.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 62,546
NZ_FYDG01000017.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 55,868
NZ_FYDG01000018.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 41,107
NZ_FYDG01000019.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 37,176
NZ_FYDG01000020.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 33,192
NZ_FYDG01000021.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 33,033
NZ_FYDG01000022.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 28,703
NZ_FYDG01000023.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 24,099
NZ_FYDG01000024.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 19,504
NZ_FYDG01000025.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 18,606
NZ_FYDG01000026.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 18,158
NZ_FYDG01000027.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 17,625
NZ_FYDG01000028.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 16,419
NZ_FYDG01000029.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 16,184
NZ_FYDG01000030.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 15,780
NZ_FYDG01000031.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 15,622
NZ_FYDG01000032.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 15,467
NZ_FYDG01000033.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 14,945
NZ_FYDG01000034.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 14,051
NZ_FYDG01000035.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 13,596
NZ_FYDG01000036.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 11,825
NZ_FYDG01000037.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 11,744
NZ_FYDG01000038.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 11,446
NZ_FYDG01000039.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 11,187
NZ_FYDG01000040.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 10,598
NZ_FYDG01000041.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 9,987
NZ_FYDG01000042.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 9,547
NZ_FYDG01000043.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 8,920
NZ_FYDG01000044.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 8,193
NZ_FYDG01000045.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 8,086
NZ_FYDG01000046.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 5,946
NZ_FYDG01000047.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 5,538
NZ_FYDG01000048.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 5,446
NZ_FYDG01000049.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 4,470
NZ_FYDG01000050.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 4,370
NZ_FYDG01000051.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 3,476
NZ_FYDG01000052.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 3,090
NZ_FYDG01000053.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 2,830
NZ_FYDG01000054.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 2,658
NZ_FYDG01000055.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 2,475
NZ_FYDG01000056.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,999
NZ_FYDG01000057.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,968
NZ_FYDG01000058.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,820
NZ_FYDG01000059.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,706
NZ_FYDG01000060.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,705
NZ_FYDG01000061.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,678
NZ_FYDG01000062.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,603
NZ_FYDG01000063.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,518
NZ_FYDG01000064.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,515
NZ_FYDG01000065.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,430
NZ_FYDG01000066.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,422
NZ_FYDG01000067.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,359
NZ_FYDG01000068.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,271
NZ_FYDG01000069.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,244
NZ_FYDG01000070.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,239
NZ_FYDG01000071.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,161
NZ_FYDG01000072.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,153
NZ_FYDG01000073.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,076
NZ_FYDG01000074.1 Rhodoblastus acidophilus strain DSM 137, whole genome shotgun sequence 1,015

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory