fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thermoflexus hugenholtzii JAD2

Genome identifier: GCF_900187885.1

NCBI assembly name: IMG-taxon 2140918011 annotated assembly

GTDB taxonomy: Bacteria, Chloroflexota, Anaerolineae, Thermoflexales, Thermoflexaceae, Thermoflexus, Thermoflexus hugenholtzii

NCBI taxonomy: Bacteria, Chloroflexota, Thermoflexia, Thermoflexales, Thermoflexaceae, Thermoflexus, Thermoflexus hugenholtzii

Scaffolds: 78

Genes: 2,964 Protein-coding: 2,900 RNAs: 54 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FYEK01000001.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 151
NZ_FYEK01000002.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 133,720
NZ_FYEK01000003.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 405,611
NZ_FYEK01000004.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 130
NZ_FYEK01000005.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 29,862
NZ_FYEK01000006.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 394
NZ_FYEK01000007.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 44,881
NZ_FYEK01000008.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 70,912
NZ_FYEK01000009.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 126
NZ_FYEK01000010.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 34,761
NZ_FYEK01000011.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 157
NZ_FYEK01000012.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 170,709
NZ_FYEK01000013.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 1,060
NZ_FYEK01000014.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 162
NZ_FYEK01000015.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 40,377
NZ_FYEK01000016.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 467
NZ_FYEK01000017.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 123
NZ_FYEK01000018.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 99,336
NZ_FYEK01000019.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 842
NZ_FYEK01000020.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 90,233
NZ_FYEK01000021.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 175
NZ_FYEK01000022.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 175,264
NZ_FYEK01000023.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 121
NZ_FYEK01000024.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 27,233
NZ_FYEK01000025.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 34,947
NZ_FYEK01000026.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 4,472
NZ_FYEK01000027.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 382,009
NZ_FYEK01000028.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 176,872
NZ_FYEK01000029.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 53,276
NZ_FYEK01000030.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 1,985
NZ_FYEK01000031.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 32,664
NZ_FYEK01000032.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 45,119
NZ_FYEK01000033.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 144
NZ_FYEK01000034.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 139
NZ_FYEK01000035.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 105,725
NZ_FYEK01000036.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 9,512
NZ_FYEK01000037.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 59,784
NZ_FYEK01000038.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 202
NZ_FYEK01000039.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 224
NZ_FYEK01000040.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 424
NZ_FYEK01000041.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 39,922
NZ_FYEK01000042.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 189
NZ_FYEK01000043.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 408
NZ_FYEK01000044.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 254,330
NZ_FYEK01000045.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 302
NZ_FYEK01000046.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 4,389
NZ_FYEK01000047.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 121
NZ_FYEK01000048.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 221
NZ_FYEK01000049.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 252
NZ_FYEK01000050.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 127
NZ_FYEK01000051.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 138
NZ_FYEK01000052.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 192
NZ_FYEK01000053.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 491
NZ_FYEK01000054.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 75,088
NZ_FYEK01000055.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 392
NZ_FYEK01000056.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 1,222
NZ_FYEK01000057.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 251
NZ_FYEK01000058.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 129
NZ_FYEK01000059.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 215
NZ_FYEK01000060.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 125
NZ_FYEK01000061.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 37,467
NZ_FYEK01000062.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 514
NZ_FYEK01000063.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 2,384
NZ_FYEK01000064.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 230
NZ_FYEK01000065.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 154
NZ_FYEK01000066.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 87,574
NZ_FYEK01000067.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 281
NZ_FYEK01000068.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 170
NZ_FYEK01000069.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 136
NZ_FYEK01000070.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 173
NZ_FYEK01000071.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 92,796
NZ_FYEK01000072.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 57,031
NZ_FYEK01000073.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 12,522
NZ_FYEK01000074.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 162
NZ_FYEK01000075.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 139,933
NZ_FYEK01000076.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 345
NZ_FYEK01000077.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 67,475
NZ_FYEK01000078.1 Thermoflexus hugenholtzii JAD2, whole genome shotgun sequence 104,808

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory