fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arboricoccus pini B29T1

Genome identifier: GCF_900187945.1

NCBI assembly name: IMG-taxon 2693429500 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Geminicoccales, Geminicoccaceae, Arboricoccus, Arboricoccus pini

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Geminicoccaceae, Arboricoccus, Arboricoccus pini

Scaffolds: 28

Genes: 3,724 Protein-coding: 3,621 RNAs: 54 pseudogenes: 49

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FYEH01000001.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 600,306
NZ_FYEH01000002.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 417,375
NZ_FYEH01000003.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 348,720
NZ_FYEH01000004.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 342,042
NZ_FYEH01000005.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 323,044
NZ_FYEH01000006.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 294,770
NZ_FYEH01000007.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 242,888
NZ_FYEH01000008.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 162,909
NZ_FYEH01000009.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 160,271
NZ_FYEH01000010.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 151,841
NZ_FYEH01000011.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 142,258
NZ_FYEH01000012.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 118,005
NZ_FYEH01000013.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 89,653
NZ_FYEH01000014.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 88,207
NZ_FYEH01000015.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 87,607
NZ_FYEH01000016.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 87,075
NZ_FYEH01000017.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 86,694
NZ_FYEH01000018.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 84,448
NZ_FYEH01000019.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 60,552
NZ_FYEH01000020.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 60,521
NZ_FYEH01000021.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 53,789
NZ_FYEH01000022.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 26,791
NZ_FYEH01000023.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 10,352
NZ_FYEH01000024.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 7,907
NZ_FYEH01000025.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 6,482
NZ_FYEH01000026.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 5,796
NZ_FYEH01000027.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 3,826
NZ_FYEH01000028.1 Arboricoccus pini strain B29T1, whole genome shotgun sequence 1,344

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory