fast.genomicscompare 6,575 genera of bacteria & archaea

 

Scatolibacter rhodanostii Marseille-P3890

Genome identifier: GCF_900197595.1

NCBI assembly name: PRJEB21487

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Acutalibacteraceae, Scatolibacter, Scatolibacter rhodanostii

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Scatolibacter, Scatolibacter rhodanostii

Scaffolds: 13

Genes: 2,515 Protein-coding: 2,442 RNAs: 56 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FZLO01000001.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 1,012,119
NZ_FZLO01000002.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 610,653
NZ_FZLO01000003.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 318,967
NZ_FZLO01000004.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 231,719
NZ_FZLO01000005.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 201,948
NZ_FZLO01000006.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 162,704
NZ_FZLO01000007.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 129,393
NZ_FZLO01000008.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 9,732
NZ_FZLO01000009.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 7,461
NZ_FZLO01000010.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 5,513
NZ_FZLO01000011.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 5,372
NZ_FZLO01000012.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 4,653
NZ_FZLO01000013.1 Scatolibacter rhodanostii strain Marseille-P3890, whole genome shotgun sequence 1,790

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory