fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pygmaiobacter massiliensis Marseille-P3336

Genome identifier: GCF_900199435.1

NCBI assembly name: PRJEB21892

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Pygmaiobacter, Pygmaiobacter massiliensis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Pygmaiobacter, Pygmaiobacter massiliensis

Scaffolds: 3

Genes: 2,696 Protein-coding: 2,624 RNAs: 65 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_OAML01000001.1 Pygmaiobacter massiliensis strain Marseille-P3336, whole genome shotgun sequence 1,977
NZ_OAML01000002.1 Pygmaiobacter massiliensis strain Marseille-P3336, whole genome shotgun sequence 915,290
NZ_OAML01000003.1 Pygmaiobacter massiliensis strain Marseille-P3336, whole genome shotgun sequence 1,886,982

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory