fast.genomicscompare 6,575 genera of bacteria & archaea

 

Caenispirillum bisanense_A USBA 140

Genome identifier: GCF_900230255.1

NCBI assembly name: IMG-taxon 2667528161 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Caenispirillum, Caenispirillum bisanense_A

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Caenispirillum, Caenispirillum bisanense

Scaffolds: 41

Genes: 5,014 Protein-coding: 4,907 RNAs: 61 pseudogenes: 46

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_OCNJ01000001.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 929,312
NZ_OCNJ01000002.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 609,222
NZ_OCNJ01000003.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 546,696
NZ_OCNJ01000004.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 445,823
NZ_OCNJ01000005.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 424,775
NZ_OCNJ01000006.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 380,146
NZ_OCNJ01000007.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 319,959
NZ_OCNJ01000008.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 310,460
NZ_OCNJ01000009.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 186,299
NZ_OCNJ01000010.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 153,246
NZ_OCNJ01000011.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 144,450
NZ_OCNJ01000012.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 122,049
NZ_OCNJ01000013.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 95,734
NZ_OCNJ01000014.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 95,060
NZ_OCNJ01000015.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 73,586
NZ_OCNJ01000016.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 71,666
NZ_OCNJ01000017.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 66,294
NZ_OCNJ01000018.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 50,646
NZ_OCNJ01000019.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 41,225
NZ_OCNJ01000020.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 37,120
NZ_OCNJ01000021.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 34,543
NZ_OCNJ01000022.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 34,071
NZ_OCNJ01000023.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 21,636
NZ_OCNJ01000024.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 17,478
NZ_OCNJ01000025.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 10,692
NZ_OCNJ01000026.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 9,610
NZ_OCNJ01000027.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 9,424
NZ_OCNJ01000028.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 5,847
NZ_OCNJ01000029.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 5,497
NZ_OCNJ01000030.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 3,233
NZ_OCNJ01000031.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 2,414
NZ_OCNJ01000032.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 2,280
NZ_OCNJ01000033.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 2,216
NZ_OCNJ01000034.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 2,158
NZ_OCNJ01000035.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 1,759
NZ_OCNJ01000036.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 1,792
NZ_OCNJ01000037.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 1,762
NZ_OCNJ01000038.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 1,391
NZ_OCNJ01000039.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 1,384
NZ_OCNJ01000040.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 1,258
NZ_OCNJ01000041.1 Caenispirillum bisanense strain USBA 140, whole genome shotgun sequence 1,240

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory