fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phocaeicola_A sp900291465 Marseille-P4684

Genome identifier: GCF_900291465.1

NCBI assembly name: PRJEB24949

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Phocaeicola_A, Phocaeicola_A sp900291465

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Bacteroides

Scaffolds: 3

Genes: 2,862 Protein-coding: 2,727 RNAs: 81 pseudogenes: 54

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LT985808.1 Bacteroides sp. Marseille-P3684 strain Marseille-P4684, whole genome shotgun sequence 3,706,277
NZ_LT985809.1 Bacteroides sp. Marseille-P3684 strain Marseille-P4684, whole genome shotgun sequence 1,056
NZ_LT985810.1 Bacteroides sp. Marseille-P3684 strain Marseille-P4684, whole genome shotgun sequence 832

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory