fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ascidiaceihabitans donghaensis CECT 8599

Genome identifier: GCF_900302465.1

NCBI assembly name: A.donghaensisCECT8599_Spades_Prokka

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Ascidiaceihabitans, Ascidiaceihabitans donghaensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Ascidiaceihabitans, Ascidiaceihabitans donghaensis

Scaffolds: 7

Genes: 4,012 Protein-coding: 3,945 RNAs: 51 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_OMOR01000001.1 Ascidiaceihabitans donghaensis strain CECT 8599, whole genome shotgun sequence 3,729,116
NZ_OMOR01000002.1 Ascidiaceihabitans donghaensis strain CECT 8599, whole genome shotgun sequence 138,640
NZ_OMOR01000003.1 Ascidiaceihabitans donghaensis strain CECT 8599, whole genome shotgun sequence 119,343
NZ_OMOR01000004.1 Ascidiaceihabitans donghaensis strain CECT 8599, whole genome shotgun sequence 48,312
NZ_OMOR01000005.1 Ascidiaceihabitans donghaensis strain CECT 8599, whole genome shotgun sequence 36,214
NZ_OMOR01000006.1 Ascidiaceihabitans donghaensis strain CECT 8599, whole genome shotgun sequence 5,513
NZ_OMOR01000007.1 Ascidiaceihabitans donghaensis strain CECT 8599, whole genome shotgun sequence 502

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory